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Gene ages inferred using GenEra on reference protein sequences from NCBI protein coding genes (https://www.ncbi.nlm.nih.gov/assembly/GCF_002055965.1/). Note: DIAMOND was run using the sensitive mode.

Usage

Bacillus_subtilis.PhyloMap

Format

A tibble with 4,333 rows and 2 variables:

Phylostratum

dbl Phylostratum (or gene age) assignment

GeneID

proteinID annotation from NCBI

Source

Kalábová (2024) Unpublished https://github.com/LotharukpongJS/phylomapr