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Gene ages inferred using GenEra on reference protein sequences from JGI proteomes (Auriculariopsis ampla NL-1724 v1.0 (Auramp1)). Note: DIAMOND was run using the sensitive mode.

Usage

Auriculariopsis_ampla.PhyloMap

Format

A tibble with 26,484 rows and 2 variables:

Phylostratum

dbl Phylostratum (or gene age) assignment

GeneID

GeneID annotation from JGI

Source

Kalábová (2024) Unpublished https://github.com/LotharukpongJS/phylomapr